Harbour seal (Phoca vitulina) abundance within the Firth of Tay and Eden Estuary,Scotland: recent trends and extrapolation to extinction

1. Aerial surveys have detected alarming declines in counts of harbour seals in several regions across Scotland.
2. Demographic data and simple models were used to examine the recent decline in the numbers of harbour seals counted in one population within a Special Area of Conservation (SAC) on the east coast of Scotland. The models suggest that the continuation of current trends would result in the species effectively disappearing from this area within the next 20 years.
3. While the cause of the decline is unknown, it must be reducing adult survival because the high rate of decline cannot be wholly accounted for by changes in other demographic parameters.
4. Recovery of the population to the abundance recorded at the time the SAC was designated (2005) is likely to take at least 40 years, even if the cause of the decline is immediately identified and removed.
5. The models suggest that partial removal of the cause can have only limited benefits to population recovery, and there are unlikely to be any long‐term benefits from introducing or reintroducing additional individuals while the underlying problem persists. Therefore, if the population of harbour seals in this area is to recover it is essential that the sources of the increased mortality are identified and measures are put in place to manage these.

Copyright © 2015 John Wiley & Sons, Ltd.     

杂交旱稻丰产节水栽培关键技术研究与集成应用

针对安徽沿淮地区气候特点,通过试验筛选出适宜沿淮地区旱种旱管栽培,丰产性和稳产性较好的旱稻品种5个,节水耐旱型水稻品种7个;明确了沿淮地区以旱优73为代表的杂交旱稻的丰产节水栽培技术:播种期6月5-12日,播种量2.0 kg/667 m~2左右,氮肥用量10~14 kg/667 m~2;在施肥过程中适当降低基蘖肥用量、增施穗粒肥,基、蘖、穗肥比例以4∶4∶2较好。     

基于PSR模型的黄河陕西段鱼类增殖放流生态安全评价

基于压力、状态、响应模型(PSR)和层次分析法(AHP),确定17项指标通过数据的标准化处理,指标权重赋值、权重一致性检验、评价等级确定以及评价模型的构建,用生态安全评价黄河陕西段鱼类增殖放流效果,分析生态安全所面临的主要问题。结果表明:黄河陕西段2013年增殖放流生态安全度(ESI)评价等级为Ⅱ级,为良好状态;2014年评价等级为Ⅲ级,处于一般状态;2015年评价等级为Ⅳ级,处于较差状态,属于临界不安全状态以下水平。生态安全形势呈现出逐年下降局势。不安全状态受到影响较大的前3个指标是:黄河径流量变化影响、重要生境保持率和公众资源环境保护意识的影响,3个指标下降值占到下降ESI值的64.93%。其次还受到污水排放达标率、鱼类增殖放流量、政策和管理水平、鱼类生物多样性指数、保护区建设、水质综合污染指数、群落结构等诸多因素影响。研究显示,现阶段增殖放流对黄河生态安全有一定影响,还存在一定提升空间。     

Polymerisation of gluten proteins in developing wheat grain as affected by desiccation

The breadmaking quality of wheat is affected by the composition of gluten proteins and the polymerisation of subunits that are synthesised and accumulated in developing wheat grain. The biological mechanisms and time course of these events during grain development are documented, but not widely confirmed. Therefore, the aim of this study was to monitor the accumulation of gluten protein subunits and the size distribution of protein aggregates during grain development. The effect of desiccation on the polymerisation of gluten proteins and the functional properties of gluten were also studied. The results showed that the size of glutenin polymers remained consistently low until yellow ripeness (YR), while it increased during grain desiccation after YR. Hence, this polymerisation process was presumed to be initiated by desiccation. A similar polymerisation event was also observed when premature grains were dried artificially. The composition of gluten proteins, the ratios of glutenin to gliadin and high molecular weight-glutenin subunits to low molecular weight-glutenin subunits, in premature grain after artificial desiccation showed close association with the size of glutenin polymers in artificially dried grain. Functional properties of gluten in these samples were also associated with polymer size after artificial desiccation.     

Disulphide structure of high-molecular-weight (HMW-) gliadins as affected by terminators

This study aimed at elucidating SS-bonds of HMW-gliadins (HGL) from wheat with the focus on terminators of glutenin polymerisation. HGL from wheat flour extracts non-treated or treated with the S-alkylation reagent N-ethylmaleinimide (NEMI) were compared. HGL from wheat flour Akteur were isolated, hydrolysed with thermolysin and the resulting peptides pre-separated by gel permeation chromatography and analysed by liquid chromatography/mass-spectrometry using alternating electron transfer dissociation/collision-induced dissociation. Altogether, 22 and 28 SS-peptides from samples without and with NEMI treatment, respectively, were identified. Twenty-six peptides included standard SS-bonds of α- and γ-gliadins, high-molecular-weight and low-molecular-weight glutenin subunits. Eleven SS-bonds were identified for the first time. Fifteen peptides unique to HGL contained cysteine residues from gliadins with an odd number of cysteines (ω5-, α- and γ-gliadins). Thus, gliadins with an odd number of cysteines, glutathione and cysteine had acted as terminators of glutenin polymerisation. Decisive differences between samples without and with NEMI treatment were not obvious showing that the termination of polymerisation was already completed in the flour. The two HGL samples, however, were different in the majority of ten peptides that included disulphide-linked low-molecular-weight (LMW) thiols such as glutathione and cysteine with the former being enriched in the non-treated HGL-sample.     

A rapid extensigraph protocol for measuring dough viscoelasticity and mixing requirement

The extensigraph is particularly useful in characterizing dough viscoelastic properties; however, testing throughput for standard method is low due to the prerequisite for farinograph water absorption, long dough resting and milling to prepare large amounts of flour. Therefore, a rapid extensigraph method was developed that reduced sample size (165 g wheat) for milling and more than tripled throughput. Wheat is milled in Quadrumat Junior mill with a modified sieving system. The resulting flour (100 g) was mixed with a pin mixer at constant water absorption to allow the evaluation of wheat genotypes at the absorption level they are expected to perform. Dough was subsequently stretched by an extensigraph after 15 min of floor time and 30 min resting. Strong correlations for extensigram R_max (r > 0.93), extensibility (r > 0.64) and area (r > 0.88) were found for the proposed method compared to the standard method. Mixing parameters (time and energy) obtained during dough preparation provided further information about dough strength and mixing requirement. By significantly reducing sample size requirement and increasing testing throughput, this rapid extensigraph method can be widely adopted in milling and baking industry and meets the need for a fast evaluation of dough strength in breeding trials.     

A century of fishery data documenting the collapse of smooth‐hounds (Mustelus spp.) in the Mediterranean Sea

1. Conservation and management of shark populations is increasingly becoming important in many marine regions, since there is a growing body of evidence showing that several species are threatened and continuing to decline because of unregulated fishing. Quantifying the extent of sharks' decline, the risk of species extinction, and the consequences for marine ecosystems have been challenging and controversial, mostly due to data limitations.
2. In this study, more than one century of multiple‐sources of bibliographic records on presence and frequency of occurrence of three species of commercial sharks, the smooth‐hounds Mustelus spp., in the Mediterranean Sea were compiled and analysed. Generalized additive models for location, scale and shape (GAMLSS) were used to estimate the rate of change of two of these species, Mustelus mustelus and Mustelus punctulatus, in four Mediterranean regions.
3. Model results showed that smooth‐hounds have declined by 80–90% since the beginning of last century to almost disappear in a large part of their original distributional range during the 1980s and 1990s.
4. Based on modelling results, a revision of the current International Union for Conservation of Nature classification of Mediterranean smooth‐hounds would be advisable along with the application of urgent conservation measures.

     

Three‐dimensional visualization of green fluorescence protein‐labelled Edwardsiella tarda in whole Medaka larvae

The invasive fish pathogen Edwardsiella tarda is common in aquatic environments and causes the environmentally and economically destructive emphysematous putrefactive disease called edwardsiellosis. In order to understand the organism's infection pathway, medaka larvae (Oryzias latipes) were immersion‐infected with E. tarda labelled with green fluorescence protein (GFP) and then visualized in three dimensions under confocal laser microscopy and light‐sheet fluorescence microscopy. Confocal microscopy revealed GFP‐labelled E. tarda in the mouth, head, gill bridges, gill cover, skin, membrane fin, gastrointestinal tract and air bladder, and in the caudal vein, somite veins, caudal artery and caudal capillaries. Light‐sheet microscopy additionally showed GFP‐labelled E. tarda in the pharyngeal cavity, muscle of the pectoral fin and cardiac atrium and ventricle. These findings suggest that during its infection of fish, E. tarda initially adheres to, and invades, the epithelial cells of the skin, gills and gastrointestinal tract (through the pharyngeal cavity); E. tarda then enters the blood vessels to access organs, including the air bladder and heart.     

Otolith elemental characteristics of whitefish (Coregonus lavaretus) from brackish waters of the Gulf of Bothnia,Baltic Sea

To investigate whether European whitefish (Coregonus lavaretus) groups in the brackish (≤7%) Gulf of Bothnia (Baltic Sea) express specific otolith elemental characteristics, concentrations of elements (Ca, Ba, Sr, Zn, Mn, Fe) in whole otoliths were studied by inductively coupled plasma‐optical emission spectrometry. Whitefish (N = 67) were sampled from six different latitudinal sites; four in the sea and two in rivers along the west coast of Finland, and from a fresh water lake for comparison. The concentration of several elements showed significant differences among sampling sites. Otolith Ba concentrations were higher at the northern sampling sites compared to the southern ones, thereby showing negative association to capture‐habitat salinity. In contrast, otolith Sr and Zn concentrations were lower at the northern sampling sites, thereby associating positively to capture‐habitat salinity. Otolith Mn concentrations did not associate with latitude or salinity but markedly varied between sampling sites. Elevated Fe concentrations occurred in fish otoliths from the two northernmost sites. Ca concentrations were at the same levels in otoliths from all whitefish samples. Otoliths of whitefish from the lake had very high Ba and low Sr concentrations compared to concentrations in otoliths from whitefish in the sea and rivers. Our results show that otolith elemental characteristics of whitefish vary considerably at various geographic scales showing high potential for population identification using elemental fingerprints. Analysis of otolith elemental characteristics may therefore provide an efficient tool for the identification of main areas of residence, spawning locations, and migration routes, thus contributing towards the sustainable management of whitefish stocks.